CDS

Accession Number TCMCG017C28503
gbkey CDS
Protein Id OMO65606.1
Location complement(join(2423..3991,4083..4094))
GeneID InterPro:IPR006568
Organism Corchorus olitorius
locus_tag COLO4_31110

Protein

Length 526aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020822.1
Definition PSP, proline-rich [Corchorus olitorius]
Locus_tag COLO4_31110

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor 3B subunit
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12829        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAGCCGAGCGACGTCGTAGGAGGCGCAAGCAGAAGAAGAACAAGTACTCGTCCCAGCAGCAACTGAATGACGCCGCTAACGGTACGGTTTCGGAAGCCGGTGATAGCGGCGCCGGAGAAGATGAAAAGAAGGAGAACTCCGATCACCAACAAGTTGCGGAACAAGTTATTATTGTTGAGTACGTTGCTGAGTTAGATGATGGCATCGATGAGGAATTTAAAAAGATTTTTGAGAAATTCAGCTTTGCTGTCTCTGAGGAGGAGACAGGTAAGAAGGATGAGTTTGCAGATGCAAAAAAGAAGGCTGATTCTGATTCAGAAGAAGATTATCAACAGAAAGAGAAAGGCACATCAAACAAGAAGAAGAAGAAGAGGATGAAAAATGGTGAACTGAAAAAGATTTGCTCAAGGCCTGATGTTGTAGAGGCGTGGGATGCTACTGCTGCAGATCCAAAGTTGTTGGTTTTGTTCAAGGCATACAGAAACACTGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATATTTAGAGGGAAAACGTGGTATTGAGAAGAAACCTTTCCAGCTTCCTGATTTCATTGCAGCAACAGGGATTGCAAAAATTAGACAGGCTTACATTGAAAAAGAGGACAGTAAGAAGTTGAAACAAAAGCAACGTGAGCGAATGCAGCCTAAGATGGGGAAAATGGATATAGACTATCAGCTACTCCATGATGCATTCTTTAAATATCAGACAAAAACAAAGCTGACAAGTTATGGGGATCTCTATTATGAAGGGAAAGAATTTGAAGTAAAGATGAAGCCAGTTGGCTCTCTATCATCACTATCACATGAACTGAAAGAAGCTCTTGGTATGGCAGAATTAGGTGGTCCAGCTCCACCCCCATGGCTTATCAATATGCAGAGGTATGGTCCTCCACCTTCTTATCCACATTTGAAGATAGCAGGGCTAAATGCACCCATCCCTCCTGGAGCAAGCTTTGGTAACCACCCTGGTGGCTGGGGAAAACCTCCTGTAGATGAGTCTGGACGACCTTTGTATGGAGATGTTTTTGGAGTTCAACAACCCAACTATGAGGAGGAGCCGCCTGTTGATAAGTCAAAGCATTGGGGTGATTTGGTGGAAGCGGAGGAGGAGGAGATTGAGGAGGATGGAATTCAGTCCGTTTCAAGTACTCCAACTGGTGATGAGGCACCTGATGTCATTGACCTTCGTAAACAGAAGAGAAAGGAGCCCGAGAGGTCTCTTTACCAAGTGCTTGAAGAAAAAGAAGACAAGATTGCTCCTGGGACTTTACTTGGTACAACACACACCTATGTTGTTAACACTGACAAGTCAGCAGCCAAAAGGGTTGAGAAAACTGACAGGGTGGAAGTCAGTCTACAGCCAGAGGAATTGCAAGTTATGGACAATGTGTTGCCAGCCAAGTATGAAGAAGCTAGGGAGGAAGAGCAGCTACGAAGTCAGCACGAGGACTTTAGCGATATGGTGGCTGAGAATGAGAAGAAAAGGAAGCGAAAGATGCAGGAGAAAGAGGGTAAATCAAAGAAGAAGAAGAAGGATTTCAAATTCTGA
Protein:  
MKAERRRRRRKQKKNKYSSQQQLNDAANGTVSEAGDSGAGEDEKKENSDHQQVAEQVIIVEYVAELDDGIDEEFKKIFEKFSFAVSEEETGKKDEFADAKKKADSDSEEDYQQKEKGTSNKKKKKRMKNGELKKICSRPDVVEAWDATAADPKLLVLFKAYRNTVPVPRHWCQKRKYLEGKRGIEKKPFQLPDFIAATGIAKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQLLHDAFFKYQTKTKLTSYGDLYYEGKEFEVKMKPVGSLSSLSHELKEALGMAELGGPAPPPWLINMQRYGPPPSYPHLKIAGLNAPIPPGASFGNHPGGWGKPPVDESGRPLYGDVFGVQQPNYEEEPPVDKSKHWGDLVEAEEEEIEEDGIQSVSSTPTGDEAPDVIDLRKQKRKEPERSLYQVLEEKEDKIAPGTLLGTTHTYVVNTDKSAAKRVEKTDRVEVSLQPEELQVMDNVLPAKYEEAREEEQLRSQHEDFSDMVAENEKKRKRKMQEKEGKSKKKKKDFKF